I will analyze your bulk rnaseq data with publication ready figures
Bioinformatics Specialist Data Scientist
About this Gig
Struggling with RNA-seq analysis? I'll transform your raw sequencing data into publication-quality results.
WHAT YOU GET:
Quality control reports (FastQC, MultiQC)
Differential expression analysis (DESeq2 or edgeR)
Volcano plot showing up/downregulated genes
PCA plot with sample clustering
Heatmap of top differentially expressed genes
GO/KEGG pathway enrichment analysis
CSV files with all statistics and gene lists
Written methods section (ready for your paper)
WHAT I NEED FROM YOU:
- FASTQ files (or SRA accession numbers)
- Sample information (which samples are control vs treatment)
- Organism name (I can work with any species with a transcriptome)
I use industry-standard tools: Salmon/STAR for alignment, DESeq2/edgeR for statistics, clusterProfiler for pathway analysis. All analysis is fully reproducible with documented code.
EXPERIENCE: Multi-tissue RNA-seq (brain, liver, kidney, testes, fat) Time-series experiments (photoperiod response) Low-count data and rare transcripts Clinical variant calling from RNA-seq Non-model organisms without annotation.
Questions? Message me before ordering. I'm happy to discuss your specific needs and recommend the right package!
Technology:
Pandas
•
RStudio
Expertise:
Experiment design
•
Statistics
•
Other
Programming language:
Python
•
R

