I will develop reproducible omics pipelines

Reproducible RNA-Seq, DNA-Seq, and Ribo-Seq Pipelines

Are you working with RNA-Seq, DNA-Seq, or Ribo-Seq data and need robust, reproducible analysis workflows?

I will build custom omics pipelines using Snakemake or Nextflow, designed for scalability, clarity, and reproducibility.

My pipelines follow best practices in bioinformatics and are modular, well-documented, and environment-controlled (Conda or virtualenv). Whether you're processing a single sample or a full experimental batch, Ill help you automate QC, alignment, quantification, and differential analysis with flexibility to integrate downstream tools and visualizations.

This service includes fully automated RNA-Seq analysis workflows using tools like STAR, HISAT2, and DESeq2 from raw FASTQ to final differential expression and visualization.

• Single- and multi-sample workflows
• Configurable rules and parameters
• Clear output structure and documentation
• Compatible with local or HPC execution
• Optional ML-ready outputs and enrichment hooks

Let's streamline your omics analysis and ensure it's publication-ready, reproducible, and future-proof.

Contact me to discuss your project before placing an order.