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I will perform molecular docking analysis using autodock vina for your research
About this Gig
Accurate Molecular Docking for Your Research, Thesis, or Publication
I hold an MPhil in Biochemistry (4.0 GPA) with research experience in computational drug discovery, including structure based virtual screening for potential drug targets with some published work and a few papers submitted. I provide reliable, well documented docking analysis that you can confidently include in your thesis, coursework, or publication.
Services include:
- Protein structure retrieval and validation (SAVES, Ramachandran analysis)
- Active site identification (PrankWeb, I-TASSER, or literature based)
- Ligand and receptor preparation (AutoDockTools)
- Molecular docking using AutoDock Vina (single ligand or batch/virtual screening)
- Binding affinity analysis and 2D/3D interaction visualization
- Clear, structured report with graphs and tables
Suitable for graduate students, researchers, and academics needing dependable docking support for thesis work, coursework, or publications.
Note: This gig covers docking and virtual screening only; molecular dynamics (MD) simulation is not currently offered.
Service type:
Research
Language:
English
Delivery style preference
Please inform the freelancer of any preferences or concerns regarding the use of AI tools in the completion and/or delivery of your order.
Academic work to be done for you, is unethical since it violates most schools’ Honor Codes.
Asking sellers to prepare homework/academic works on your behalf is against Fiverr’s Community Standard and may lead to your account being disabled.
FAQ
What information do you need from me to get started?
Please provide the target protein (PDB ID or structure file) and the ligand(s) you want docked (name, structure file, or SMILES/compound ID). If you don't know the exact binding site, let me know, I can help identify it using literature or prediction tools like PrankWeb.
Will I receive the raw files, not just a report?
Yes. You will get the docking output files (PDBQT/log files), binding affinity scores, and a clear report summarizing the results.
Are these results suitable for a thesis or publication?
Yes, I provide clear, well documented results so you can confidently include them in your thesis, coursework, or paper. (Note: results still need to be interpreted/discussed in the context of your specific research I provide the computational analysis, not the surrounding academic writing.
Is my data kept confidential?
Yes, your target protein, compounds, and results are kept fully confidential.
