I will process and analyze your genomics or vcf data using python
Python Developer Bioinformatics Data Analyst
About this Gig
Do you have genomics data that needs processing, filtering, or
annotation but don't know where to start?
I will build a reliable bioinformatics pipeline to process your
VCF, BCF, or GWAS data using industry-standard tools delivering
clean, annotated, analysis-ready results.
What I can do:
VCF/BCF file processing and format conversion
Variant filtering by quality, depth, and allele frequency
SNP annotation using Ensembl VEP
PLINK-based GWAS data processing
bcftools QC stats and summary reports
File format conversions (VCF, BCF, PLINK, haps/sample)
Python automation of full pipeline workflows
Data visualization of variant distributions and quality metrics
What you'll receive:
Processed, filtered output files
QC summary report
Python pipeline script (clean, commented, reusable)
Clear documentation and usage instructions
I work with bcftools, tabix, PLINK, Ensembl VEP, and Python
the same tools used in production GWAS and genomics research pipelines.
Message me before ordering to describe your dataset and goals.

