I will run gromacs molecular dynamics simulation for your protein

M. Uzair

Pakistan

I speak Urdu, English, Chinese

Bioinformatics and Computational Chemistry, Vaccine Design, MD Simulation, DFT

I help students and researchers get clean, defensible results from vaccine design, molecular dynamics simulation, DFT calculations, and protein structure prediction — without the trial-and-error of ru...
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About this Gig

I run complete molecular dynamics simulations using GROMACS in a Linux environment energy minimization, NVT/NPT equilibration, production run, and post-simulation structural analysis with all results plotted and explained.

I can help you:

  • Prepare and minimize your protein structure (PDB file)
  • Run NVT and NPT equilibration with temperature/pressure/density plots
  • Run a production simulation
  • Calculate RMSD (structural stability over time)
  • Calculate RMSF (per-residue flexibility)
  • Calculate radius of gyration (protein compactness)
  • Deliver a written summary interpreting what the results mean for your protein's stability

Ideal for students who need a full MD simulation with proper structural analysis for a thesis, assignment, or research project not just raw output, but a clear explanation of what it shows.

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run gromacs molecular dynamics simulation for your protein
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run gromacs molecular dynamics simulation for your protein
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run gromacs molecular dynamics simulation for your proteinrun gromacs molecular dynamics simulation for your proteinrun gromacs molecular dynamics simulation for your protein

Technology:

Google Analytics

•

Google Data Studio

Analysis type:

Descriptive analysis

•

Predictive analysis

Expertise:

Prediction

•

Probability

•

Math

Programming language:

Python

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