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I will perform rnaseq differential gene expression analysis using edger or deseq
Bioinformatics Analyst and Science Writer for RNA Seq and NGS Data
i am MS Bioinformatics student at NUST with a BSc in Optometry. I have hands-on experience
in next-generation sequencing (NGS) data analysis. My skills include RNA-Seq analysis, differential gene exp...
About this Gig
Are you looking for professional RNA-Seq differential gene expression analysis?
I will perform complete DGE analysis on your count matrix data using edgeR or DESeq2 in R.
What you will get:
- Quality control (PCA plot and heatmap)
- Outlier detection and removal
- TMM normalisation
- Differential expression analysis
- Volcano plot with significant genes highlighted
- Full results CSV file
- Summary of upregulated and downregulated genes
I have hands-on experience analyzing large RNA-Seq datasets with hundreds of samples using edgeR and DESeq2 pipelines in R.
Please message me before ordering to discuss your data and requirements!
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FAQ
What format should my data be in?
I need a raw count matrix in .txt or .csv format and a metadata file with sample group information.
Which tool do you use edgeR or DESeq2?
I can use either edgeR or DESeq2 depending on your preference. Both give reliable results for RNA-Seq DGE analysis.
What will I receive after the analysis?
You will receive high resolution figures including PCA plot, heatmap and volcano plot, a CSV file with all results, and a summary of differentially expressed genes.
